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GoPubMed Proteins lists recent and important papers and reviews for proteins. Page last changed on 19 Dec 2016.

Single stranded DNA binding protein 3

SSDP, SSBP3, SSDP1, sequence-specific single-stranded-DNA-binding protein, CSDP
chicken homologue participates in the transcriptional regulation of the alpha 2(I) collagen gene [RGD, Feb 2006] (from NCBI)
Top mentioned proteins: LIM, Ldb1, CAN, CHIP, HAD
Papers on SSDP
SSBP3 Interacts With Islet-1 and Ldb1 to Impact Pancreatic β-Cell Target Genes.
Hunter et al., Birmingham, United States. In Mol Endocrinol, Dec 2015
Proteomic datasets revealed numerous interacting candidates, including a member of the single-stranded DNA-binding protein (SSBP) coregulator family, SSBP3.
Cloud-Scale Genomic Signals Processing for Robust Large-Scale Cancer Genomic Microarray Data Analysis.
Ji et al., In Ieee J Biomed Health Inform, Dec 2015
Though there have been many attempts to elucidate the issue of bringing forth biological interpretation by means of wavelet pre-processing and classification, there has not been a research effort that focuses on a Cloud-Scale Distributed Parallel (CSDP) separable one-dimensional wavelet decomposition technique for denoising through differential expression thresholding and classification of LSCG microarray data.
Stress-responsive expression patterns and functional characterization of cold shock domain proteins in cabbage (Brassica rapa) under abiotic stress conditions.
Kang et al., Kwangju, South Korea. In Plant Physiol Biochem, Nov 2015
Among the five BrCSDP genes found in the cabbage genome, one CSDP (BRU12051), named BrCSDP3, was unique in that it is localized to the chloroplast as well as to the nucleus.
Cloning and respond of a cold shock domain protein (CnCSDP) gene to cold stress in noble scallop Chlamys nobilis (Bivalve: Pectinidae).
Deng et al., Shantou, China. In Mol Biol Rep, 2014
In this study, the cDNA encoding CSDP in noble scallop Chlamys nobilis was cloned (CnCSDP), and its transcript profile in cold-stressed orange and brown strains was analyzed using real-time RT-PCR.
An ancient Pygo-dependent Wnt enhanceosome integrated by Chip/LDB-SSDP.
Bienz et al., Cambridge, United Kingdom. In Elife, 2014
Here, we use a proteomics approach to discover the Chip/LDB-SSDP (ChiLS) complex as the ligand specifically binding to NPF.
Most expression and splicing changes in myotonic dystrophy type 1 and type 2 skeletal muscle are shared with other muscular dystrophies.
Krahe et al., Houston, United States. In Neuromuscul Disord, 2014
SSBP3 exon 6 missplicing was observed in all diseased muscle and led to reduced protein.
The effect of general and drug-specific family environments on comorbid and drug-specific problem behavior: a longitudinal examination.
Hawkins et al., Washington, D.C., United States. In Dev Psychol, 2013
Analyses were based on 469 participants drawn from the Seattle Social Development Project (SSDP) sample.
Regeneration of dental pulp/dentine complex with a three-dimensional and scaffold-free stem-cell sheet-derived pellet.
Jin et al., Xi'an, China. In J Tissue Eng Regen Med, 2013
We used a tissue-engineering method based on odontogenic stem cells to design a three-dimensional (3D) and scaffold-free stem-cell sheet-derived pellet (CSDP) with the necessary physical and biological properties.
[Identification and nucleotide polymorphisms in Brassica rapa genes coding cold shock domain proteins (CSDP)].
Kochieva et al., In Mol Biol (mosk), 2013
Full-length BrCSDP2 and BrCSDP4 cold shock gene sequences of Brassica rapa are obtained.
Shotgun analysis of membrane proteomes by an improved SDS-assisted sample preparation method coupled with liquid chromatography-tandem mass spectrometry.
Liu et al., Changsha, China. In J Chromatogr B Analyt Technol Biomed Life Sci, 2013
In this paper, we present an improved sample preparation strategy based on SDS-assisted digestion and peptide-level SDS-removal using an optimized potassium dodecyl sulfate (KDS) precipitation method (SSDP method) for shotgun analysis of the membrane proteome.
Uncovering genes required for neuronal morphology by morphology-based gene trap screening with a revertible retrovirus vector.
Harada et al., Suita, Japan. In Faseb J, 2012
The third gene was single-stranded DNA-binding protein 3 (Ssbp3), a gene known to regulate head morphogenesis.
A novel cold-regulated cold shock domain containing protein from scallop Chlamys farreri with nucleic acid-binding activity.
Song et al., Qingdao, China. In Plos One, 2011
METHODOLOGY: The cDNA of a novel CSDP was cloned from Zhikong scallop Chlamys farreri (designated as CfCSP) by expressed sequence tag (EST) analysis and rapid amplification of cDNA ends (RACE) approach.
SSDP cofactors regulate neural patterning and differentiation of specific axonal projections.
Becker et al., Edinburgh, United Kingdom. In Dev Biol, 2011
CLIM cofactors associate with single-stranded DNA binding proteins (SSDPs, also known as SSBPs) thereby recruiting SSDP1 and/or SSDP2 to LIM-HD/CLIM complexes.
Regulation of C. elegans presynaptic differentiation and neurite branching via a novel signaling pathway initiated by SAM-10.
Nonet et al., Saint Louis, United States. In Development, 2011
Using the Caenorhabditis elegans mechanosensory circuit as an in vivo model, we show that SAM-10, an ortholog of mammalian single-stranded DNA-binding protein (SSDP), functions cell-autonomously in the nucleus to regulate synaptic differentiation, as well as positioning of, a single neurite branch.
Tyrosine phosphorylation controls nuclear localization and transcriptional activity of Ssdp1 in mammalian cells.
Westphal et al., Bethesda, United States. In J Cell Biochem, 2008
phosphorylation involving N-terminal tyrosine residues of Ssdp1 is a means of regulating its nuclear localization and subsequent transcriptional activation of LIM-HD complexes.
[Drosophila genes that encode LIM-domain containing proteins: their organization, functions, and interactions].
Gubenko, In Tsitol Genet, 2006
There are some well known LIM-domain-containing proteins in Drosophila: Arrowhead, Apterous, Islet, dLim and Lim3 transcription factors; DLMO and Prickle proteins, as well as Chip, RLIM, Ssdp cofactors that modulate the LIM-HD function.
Structure and functional characterization of single-strand DNA binding protein SSDP1: carboxyl-terminal of SSDP1 has transcription activity.
Wu, Bethesda, United States. In Biochem Biophys Res Commun, 2006
Thus, biochemical data of SSDP1 presented by this study provides biochemical evidence for a better understanding of transcriptional regulation.
Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development.
Westphal et al., Bethesda, United States. In Proc Natl Acad Sci U S A, 2002
Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development
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