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Ribosomal protein S16

rps16, ribosomal protein S16
Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S9P family of ribosomal proteins. It is located in the cytoplasm. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008] (from NCBI)
Top mentioned proteins: rpL32, CAN, atpB, ACID, V1a
Papers on rps16
The complete chloroplast genome of Gentiana straminea (Gentianaceae), an endemic species to the Sino-Himalayan subregion.
Dorje et al., Shanghai, China. In Gene, Mar 2016
The rps16 gene lacks exon2 between trnK-UUU and trnQ-UUG, which is the first rps16 pseudogene found in the nonparasitic plants of Asterids clade.
Plastome mutations and recombination events in barley chloroplast mutator seedlings.
Prina et al., San Nicolás de los Arroyos, Argentina. In J Hered, Feb 2016
The rpl23 and the rps16 genes were the most polymorphic.
The complete chloroplast genome sequence of Cunninghamia lanceolata.
Huang et al., Guangzhou, China. In Mitochondrial Dna, Feb 2016
Twelve protein-coding genes (rps16, ycf3, rpoC1, atpF, rps12, ndhB, rpl2, rpl16, petD, petB, ndhA, rps15) contain one or two introns.
The complete chloroplast genome of Tianshan Snow Lotus (Saussurea involucrata), a famous traditional Chinese medicinal plant of the family Asteraceae.
Hsiao et al., Ürümqi, China. In Mitochondrial Dna, Jan 2016
There are eight protein-coding genes (atpF, ndhA, ndhB, rpl2, rpoC1, rps16, clpP, and ycf3) and five tRNA genes (trnA-UGC, trnI-GAU, trnK-UUU, trnL-UAA, and trnV-UAC) containing introns.
Two complete chloroplast genomes of white campion (Silene latifolia) from male and female individuals.
Tembrock et al., Fort Collins, United States. In Mitochondrial Dna, Jan 2016
In these protein-coding genes, eight genes (rpl16, rpoC1, rps16, petD, petB, ndhB, ndhA and atpF) contain a single intron and three genes (rps12, clpP and ycf3) contain two introns.
The complete chloroplast genome of Aconitum chiisanense Nakai (Ranunculaceae).
Mun et al., Inch'ŏn, South Korea. In Mitochondrial Dna, Jan 2016
Sequence comparison with other Ranunculaceae chloroplasts identified a unique deletion in the rps16 gene of A. chiisanense chloroplast DNA that can serve as a molecular marker for species identification.
Evolutionary trends in the distylous genus Pulmonaria (Boraginaceae): Evidence of ancient hybridization and current interspecific gene flow.
Jacquemyn et al., Leuven, Belgium. In Mol Phylogenet Evol, Jan 2016
To test this hypothesis, phylogenetic analyses of nuclear ITS and plastid data (rps16, trnH-psbA, rpl16) from 48 allopatric and four sympatric populations were performed to (1) provide a molecular phylogeny for nine of the most common Pulmonaria species in Europe, (2) detect current and ancient hybridization events, and (3) assess the contribution of hybridization versus incomplete lineage sorting to the inferred phylogenetic patterns.
Phylogeny of Allium L. subgenus Anguinum (G. Don. ex W.D.J. Koch) N. Friesen (Amaryllidaceae).
Friesen et al., Osnabrück, Germany. In Mol Phylogenet Evol, Dec 2015
Here we conduct phylogenetic analysis with the nuclear marker ITS and three different chloroplast markers (rps16 intron, rbcL-atpB spacer, rpl32-trnL spacer).
Morphological and genetic discrepancies in populations of Oreocarya paradoxa and O. revealii: the impact of edaphic selection on recent diversification in the Colorado Plateau.
McGlaughlin et al., Greeley, United States. In Am J Bot, Oct 2015
METHODS: We genotyped 21 populations throughout the ranges of both species using 11 microsatellite markers and three plastid regions (trnL-F, trnT-L, trnQ-rps16) for haplotype analysis.
Complete plastid genome of Astragalus mongholicus var. nakaianus (Fabaceae).
Choi et al., Inch'ŏn, South Korea. In Mitochondrial Dna, Jul 2015
Similar to other closely related plastomes, rpl22 and rps16 are absent.
Spiraling into History: A Molecular Phylogeny and Investigation of Biogeographic Origins and Floral Evolution for the Genus Costus.
Specht et al., Berkeley, United States. In Journal 2093-4947, Feb 2015
Here we present an expansive molecular phylogeny of Costus L. (Costaceae Nakai) with a focus on the Neotropical species within the clade, sampling 47 of the known 51 Neotropical species and including five molecular markers for phylogenetic analysis (ITS, ETS, rps16, trnL-F, and CaM).
Molecular Biogeography of Tribe Thermopsideae (Leguminosae): A Madrean-Tethyan Disjunction Pattern with an African Origin of Core Genistoides.
Pan et al., Ürümqi, China. In Biomed Res Int, 2014
Phylogenetic analysis in this paper employed maximum likelihood using ITS, rps16, psbA-trnH, and trnL-F sequence data; biogeographical approaches included BEAST molecular dating and Bayesian dispersal and vicariance analysis (S-DIVA).
Phylogeography of Thlaspi arvense (Brassicaceae) in China Inferred from Chloroplast and Nuclear DNA Sequences and Ecological Niche Modeling.
Zhong et al., Shanghai, China. In Int J Mol Sci, 2014
In this paper, a phylogeographic history of T. arvense including 19 populations from China was inferred by using three chloroplast (cp) DNA segments (trnL-trnF, rpl32-trnL and rps16) and one nuclear (n) DNA segment (Fe-regulated transporter-like protein, ZIP).
A glacial survivor of the alpine Mediterranean region: phylogenetic and phylogeographic insights into Silene ciliata Pourr. (Caryophyllaceae).
García-Fernández et al., Athens, Greece. In Peerj, 2014
For this purpose, we collected DNA from 25 populations of the species that inhabit the mountains of Portugal, Spain, France, Italy, former Yugoslav Republic of Macedonia, Bulgaria and Greece and studied the plastid regions rbcL, rps16 and trnL.
[Human ribosomal protein S16 inhibites excision of the first intron from its own].
Karpova et al., In Mol Biol (mosk), 2010
Results obtained support the possibility of the autoregulation of rpS13 pre-mRNA splicing through feedback mechanism.
Interactions of human ribosomal proteins S16 and S5 with an 18S rRNA fragment containing their binding sites.
Karpova et al., Novosibirsk, Russia. In Biochimie, 2009
Data demonstrated that while ribosomal proteins S16 and S5 is able to bind to the 18S rRNA independently, their simultaneous binding has a noticeable synergetic effect.
[Binding of human ribosomal protein S16 with the 18S rRNA fragment 1203-1236/1521-1698].
Karpova et al., In Mol Biol (mosk), 2007
RpS16 was shown to specifically bind to the transcript forming a stable complex with the apparent dissociation constant of (1.3 +/- 0.1) x 10(-8) M at 20 degrees C.
Characterization of the multigene family encoding the mouse S16 ribosomal protein: strategy for distinguishing an expressed gene from its processed pseudogene counterparts by an analysis of total genomic DNA.
Perry et al., In Mol Cell Biol, 1985
Two genes from the family encoding mouse ribosomal protein S16 were cloned, sequenced, and analyzed.
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