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Ribosomal protein S20

ribosomal protein S20, RPS20
Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S10P family of ribosomal proteins. It is located in the cytoplasm. This gene is co-transcribed with the small nucleolar RNA gene U54, which is located in its second intron. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Two transcript variants encoding different isoforms have been identified for this gene. [provided by RefSeq, Apr 2009] (from NCBI)
Top mentioned proteins: CAN, ACID, GAPDH, HAD, caspase-3
Papers on ribosomal protein S20
Screening and analysis on the protein interaction of the protein VP7 in grass carp reovirus.
Jian et al., Zhanjiang, China. In Virus Genes, Jun 2015
By yeast two-hybrid system, after multiple screening with the high screening rate medium, rotary verification, sequencing and bioinformatics analysis, the interactions of the protein VP7 with ribosomal protein S20 (RPS20) and eukaryotic translation initiation factor 3 subunit b (eIF3b) in CIK cells were identified.
Identification and de novo sequencing of housekeeping genes appropriate for gene expression analyses in farmed maraena whitefish (Coregonus maraena) during crowding stress.
Goldammer et al., Germany. In Fish Physiol Biochem, Apr 2015
Thus, in the present study, the potential housekeeping genes beta actin (ACTB), elongation factor 1 alpha (EEF1A1), glyceraldehydes-3-phosphate dehydrogenase (GAPDH), ribosomal protein 9 (RPL9), ribosomal protein 32 (RPL32) and ribosomal protein S20 (RPS20) were de novo sequenced and tested concerning their applicability as reference genes in quantitative real-time PCR (qPCR) in maraena whitefish under different stocking densities.
Comprehensive analysis of the ubiquitinome during oncogene-induced senescence in human fibroblasts.
Zhang et al., Philadelphia, United States. In Cell Cycle, 2014
This includes several translation initiation factors (eIF2C2, eIF2B4, eIF3I, eIF3L, eIF4A1) and elongation factors (eEF1G, eEF1A) as well as 40S (RPS4X, RPS7, RPS11 and RPS20) and 60S ribosomal subunits (RPL10, RPL11, RPL18 and RPL35a).
Exploring valid reference genes for quantitative real-time PCR analysis in Sesamia inferens (Lepidoptera: Noctuidae).
Du et al., Yangzhou, China. In Plos One, 2014
In this study, seven candidate reference genes, 18S ribosomal RNA (18S rRNA), elongation factor 1 (EF1), glyceraldehyde-3-phosphate dehydrogenase (GAPDH), ribosomal protein S13 (RPS13), ribosomal protein S20 (RPS20), tubulin (TUB), and β-actin (ACTB) were evaluated for their suitability in normalizing gene expression under different experimental conditions.
Ribosomal Proteins RPS11 and RPS20, Two Stress-Response Markers of Glioblastoma Stem Cells, Are Novel Predictors of Poor Prognosis in Glioblastoma Patients.
Tso et al., Los Angeles, United States. In Plos One, 2014
Ribosomal protein S11 (RPS11), RPS20, individually and together, consistently predicted poor survival of newly diagnosed primary GBM tumors when overexpressed at the RNA or protein level [RPS11: Hazard Ratio (HR) = 11.5, p<0.001;
Germline mutation of RPS20, encoding a ribosomal protein, causes predisposition to hereditary nonpolyposis colorectal carcinoma without DNA mismatch repair deficiency.
Peltomäki et al., Helsinki, Finland. In Gastroenterology, 2014
Genetic linkage analysis, exome sequencing, tumor studies, and functional investigations of 4 generations of a FCCX family led to the identification of a truncating germline mutation in RPS20, which encodes a component (S20) of the small ribosomal subunit and is a new colon cancer predisposition gene.
Validation of endogenous normalizing genes for expression analyses in adult human testis and germ cell neoplasms.
Rajpert-De Meyts et al., Copenhagen, Denmark. In Mol Hum Reprod, 2014
Based on our results, we recommend using RPS20, RPS29 or SRSF4 when analysing relative gene expression levels in human testis and associated testicular pathologies.
Feed intake, average daily gain, feed efficiency, and real-time ultrasound traits in Duroc pigs: II. Genomewide association.
Cassady et al., Raleigh, United States. In J Anim Sci, 2014
Another region affecting BW at weaning was identified on SSC 4 (84-85 Mb), harboring genes previously found to influence both human and cattle height: PLAG1, CHCHD7, RDHE2 (or SDR16C5), MOS, RPS20, LYN, and PENK.
Identification of differentially expressed genes that potentially confer pest resistance in transgenic ChIFN-γ tobacco.
Zhao et al., Guiyang, China. In Gene, 2014
The mechanism of transgenic ChIFN-γ tobacco resistance also involves RPS20 and other genes that induce microRNA-based gene regulation.
Feed intake, average daily gain, feed efficiency, and real-time ultrasound traits in Duroc pigs: II. Genome-wide association.
Cassady et al., Raleigh, United States. In J Anim Sci, 2014
Another region affecting BW at weaning was identified on SSC 4 (84-85 Mb), harboring genes previously found to influence both human and cattle height: PLAG1, CHCHD7, RDHE2 (or SDR16C5), MOS, RPS20, LYN and PENK.
Selection of reference genes for quantitative real-time PCR normalization in Panax ginseng at different stages of growth and in different organs.
Zhao et al., Changchun, China. In Plos One, 2013
GAPDH/30S RPS20, CYP/60S RPL13 and CYP/QCR were the optimum pair of reference genes in the roots, stems, and leaves.
Late-assembly of human ribosomal protein S20 in the cytoplasm is essential for the functioning of the small subunit ribosome.
Lin et al., Taipei, Taiwan. In Exp Cell Res, 2013
Using immuno-fluorescent probing and Western blotting analysis, we reveal the exclusive cytoplasm nature of the small subunit ribosomal protein S20.
Ribosomal mutations cause p53-mediated dark skin and pleiotropic effects.
Barsh et al., Stanford, United States. In Nat Genet, 2008
Study reports two mouse dark skin (Dsk) loci caused by mutations in Rps19 (ribosomal protein S19) and Rps20 (ribosomal protein S20).
Medulloblastoma outcome is adversely associated with overexpression of EEF1D, RPL30, and RPS20 on the long arm of chromosome 8.
Kim et al., Houston, United States. In Bmc Cancer, 2005
Gain of 8q-mapped RPS20 is associated with adverse outcome in Medulloblastoma.
Ribonuclease E is a 5'-end-dependent endonuclease.
Mackie, Vancouver, Canada. In Nature, 1998
I have prepared covalently closed circular derivatives of natural substrates, the rpsT mRNA encoding ribosomal protein S20 and the 9S precursor to 5S ribosomal RNA, and find that these derivatives are considerably more resistant to cleavage in vitro by RNase E than are linear molecules.
[A search for specific genes working on the process of mycelial growth in Candida tropicalis].
Kamihara et al., Nara, Japan. In Nihon Ishinkin Gakkai Zasshi, 1997
Subtracted cDNAs identified by homology search included a homologue of URP2 coding ribosomal protein S20, a homologue of nmt1 coding a regulator gene working on thiamine metabolism, and a homologue of MSG5 coding tyrosine phosphatase.
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