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GoPubMed Proteins lists recent and important papers and reviews for proteins. Page last changed on 19 Aug 2016.


PALM, Paralemmin
This gene encodes a member of the paralemmin protein family. The product of this gene is a prenylated and palmitoylated phosphoprotein that associates with the cytoplasmic face of plasma membranes and is implicated in plasma membrane dynamics in neurons and other cell types. Several alternatively spliced transcript variants have been identified, but the full-length nature of only two transcript variants has been determined. [provided by RefSeq, Jul 2008] (from NCBI)
Top mentioned proteins: CAN, Actin, STEP, V1a, OUT
Papers on PALM
Arginine 66 Controls Dark-State Formation in Green-to-Red Photoconvertible Fluorescent Proteins.
Bourgeois et al., Grenoble, France. In J Am Chem Soc, Feb 2016
Photoactivated localization microscopy (PALM) is a powerful technique to investigate cellular nanostructures quantitatively and dynamically.
Dynamic Organization of Myristoylated Src in the Live Cell Plasma Membrane.
Groves et al., In J Phys Chem B, Feb 2016
Photoactivated Localization Microscopy (PALM) confirmed that c-Src partitions into clusters with low probability and showed that the characteristic size of the clusters is 10-80 nm.
Fast Optimized Cluster Algorithm for Localizations (FOCAL): a spatial cluster analysis for super-resolved microscopy.
Milstein et al., Toronto, Canada. In Bioinformatics, Dec 2015
We assess DBSCAN and FOCAL on experimental dSTORM data of clusters of eukaryotic RNAP II and PALM data of the bacterial protein H-NS, then provide a detailed comparison via simulation.
Bayesian cluster identification in single-molecule localization microscopy data.
Owen et al., London, United Kingdom. In Nat Methods, Nov 2015
Single-molecule localization-based super-resolution microscopy techniques such as photoactivated localization microscopy (PALM) and stochastic optical reconstruction microscopy (STORM) produce pointillist data sets of molecular coordinates.
Revealing GPCR oligomerization at the single-molecule level through a nanoscopic lens: methods, dynamics and biological function.
Maggio et al., Pisa, Italy. In Febs J, Nov 2015
On this subject, this review highlights recent evidence coming from Photoactivated Localization Microscopy (PALM) that allows the visualization of single molecules in dense samples, and Single-Molecule Tracking (SMT) that determines how GPCRs move and interact in living cells in the presence of different ligands.
Decruse et al., Thiruvananthapuram, India. In Cryo Letters, Sep 2015
BACKGROUND: Calamus vattayila Renuka is an endemic and endangered rattan palm of the Western Ghats, India where the development of a protocol for cryopreservation is important for their ex situ conservation in gene banks.
Modern fluorescent techniques to investigate the mechanisms of lymphocyte activation.
Kholodna et al., In Ukr Biochem J, 2015
This brief review summarizes fluorescence-based imaging techniques developed in recent years and discusses new methodological advances, such as fluorescent photoswitches, fluorescence recovery after photobleaching (FRAP), fluorescent resonance energy transfer (FRET), fluorescence lifetime imaging microscopy (FLIM), photoactivated localization microscopy (PALM), stochastic optical reconstruction microscopy (STORM), stimulated emission depletion (STED), total internal reflection fluorescence (TIRF) and other techiques.
Does super-resolution fluorescence microscopy obsolete previous microscopic approaches to protein co-localization?
Storrie et al., Little Rock, United States. In Methods Mol Biol, 2014
More recent approaches include single-molecule localization (such as photoactivated localization microscopy (PALM)/stochastic optical reconstruction microscopy (STORM)) and point spread function engineering (such as stimulated emission depletion (STED) microscopy).
Photoactivated Localization Microscopy with Bimolecular Fluorescence Complementation (BiFC-PALM).
Nan et al., Oregon, United States. In J Vis Exp, 2014
By combining bimolecular fluorescence complementation (BiFC) with photoactivated localization microscopy (PALM), PPIs can be visualized in cells with single molecule sensitivity and nanometer spatial resolution.
Challenges in quantitative single molecule localization microscopy.
Radenovic et al., Lausanne, Switzerland. In Febs Lett, 2014
Due to its advantages in labeling specificity and the relatively low overcounting caused by photoblinking when photo-activable fluorescent proteins (PA-FPs) are used as labels, we focus specifically on Photo-Activated Localization Microscopy (PALM), even though the ideas presented might be applicable to SMLM in general.
Single-molecule evaluation of fluorescent protein photoactivation efficiency using an in vivo nanotemplate.
Lakadamyali et al., Castelldefels, Spain. In Nat Methods, 2014
Here, we used the human glycine receptor expressed in Xenopus oocytes and stepwise photobleaching or single-molecule counting photoactivated localization microcopy (PALM) to determine the photoactivation efficiency of fluorescent proteins mEos2, mEos3.1,
Multifunctional enveloped nanodevices (MENDs).
Harashima et al., Sapporo, Japan. In Adv Genet, 2013
In this chapter, we review the development and evolution of the MEND by providing several successful examples, including the R8-MEND, the KALA-MEND, the MITO-Porter, the YSK-MEND, and the PALM.
Probing protein heterogeneity in the plasma membrane using PALM and pair correlation analysis.
Lippincott-Schwartz et al., Bethesda, United States. In Nat Methods, 2011
Photoactivated localization microscopy (PALM) is a powerful approach for investigating protein organization, yet tools for quantitative, spatial analysis of PALM datasets are largely missing.
Confined activation and subdiffractive localization enables whole-cell PALM with genetically expressed probes.
Shroff et al., Bethesda, United States. In Nat Methods, 2011
We demonstrate three-dimensional (3D) super-resolution microscopy in whole fixed cells using photoactivated localization microscopy (PALM).
Protein localization in electron micrographs using fluorescence nanoscopy.
Jorgensen et al., Salt Lake City, United States. In Nat Methods, 2011
We imaged the tagged proteins from ultrathin sections using stimulated emission depletion (STED) microscopy or photoactivated localization microscopy (PALM).
Palmitoylation stabilizes unliganded rod opsin.
Palczewski et al., Cleveland, United States. In Proc Natl Acad Sci U S A, 2010
report that palmitoylation-deficient (Palm(-/-)) mice carrying two Cys to Thr and Ser mutations in the opsin gene displayed profound light-induced retinal degeneration that first involved rod and then cone cells.
A transposon in Comt generates mRNA variants and causes widespread expression and behavioral differences among mice.
Williams et al., Memphis, United States. In Plos One, 2009
Expression of Palm in the mouse striatum is modulated by a sequence variant (B2 SINE indel) in the 3' UTR of Comt (catechol-O-methyltransferase).
Paralemmin-1, a modulator of filopodia induction is required for spine maturation.
El-Husseini et al., Vancouver, Canada. In Mol Biol Cell, 2008
This study identifies a key role for paralemmin-1 in spine maturation through modulation of filopodia induction.
Cellular and subcellular localization of paralemmin-1, a protein involved in cell shape control, in the rat brain, adrenal gland and kidney.
Kilimann et al., Bochum, Germany. In Histochem Cell Biol, 2007
analysis of the cellular and subcellular localization of paralemmin-1 in the rat tissues is consistent with a role for paralemmin-1 in the formation and stabilization of plasma membrane elaborations, in neurons as well as in other cell types
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