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GoPubMed Proteins lists recent and important papers and reviews for proteins. Page last changed on 19 Aug 2016.

Alpha actinin 3

Open Reading Frame, open reading frame 1
Top mentioned proteins: ACID, POLYMERASE, Orf, HAD, CAN
Papers on Open Reading Frame
Elaborate uORF/IRES features control expression and localization of human glycyl-tRNA synthetase.
Frugier et al., Strasbourg, France. In Rna Biol, Jan 2016
An intricate regulatory domain was found in its 5'-UTR which displays a functional Internal Ribosome Entry Site and an upstream Open Reading Frame.
Abnormal miRNAs Targeting Chromosome Open Reading Frame Genes were Enriched in Microvesicles Derived from the Circulation of HCC.
Li et al., Wuhan, China. In Biochem Genet, Dec 2015
UNASSIGNED: In this study, we detected the expression profiles of microRNAs (miRNAs) packaged within microvesicles (MVs) from blood samples of HCC patients and healthy donors.
Role of adenoviruses in obesity.
Dhurandhar et al., United States. In Rev Med Virol, Nov 2015
The mechanisms of action of Ad36 are due to the early gene 4, open reading frame 1 (E4-ORF1).
Transfusion-transmitted virus infection in hemodialysis patients in Arar, Saudi Arabia: Prevalence, predictors and genotyping.
Elnazi et al., Banhā, Egypt. In Saudi J Kidney Dis Transpl, Nov 2015
A case-control study compromising of 63 patients on maintenance HD therapy at the Nephrology Center of Central Arar Hospital and 100 healthy individuals who were tested for TTVDNA and its genotype by semi nested-polymerase chain reaction with primers derived from the conserved open reading frame 1 (ORF1) region followed by digestion with NdeI and PstI restriction enzyme.
LINE-1 expression and retrotransposition in Barrett's esophagus and esophageal carcinoma.
Kazazian et al., Baltimore, United States. In Proc Natl Acad Sci U S A, Oct 2015
L1 proteins must be expressed for retrotransposition to occur; therefore, we evaluated the expression of open reading frame 1 protein (ORF1p), a protein encoded by L1, in eight of the EAC cases for which formalin-fixed paraffin embedded tissue was available.
Retrotransposon insertions in the clonal evolution of pancreatic ductal adenocarcinoma.
Burns et al., Baltimore, United States. In Nat Med, Sep 2015
We recently described aberrant expression of an open reading frame 1 protein, ORF1p, encoded by long interspersed element-1 (LINE-1; L1) retrotransposon, in PDAC.
Adenovirus 36 and Obesity: An Overview.
Gnessi et al., Roma, Italy. In Viruses, Jul 2015
In vivo and in vitro studies have shown that the viral E4orf1 protein (early region 4 open reading frame 1, Adv) mediates the Adv36 effect including its adipogenic potential.
[Gene cloning, expression and characterization of N-acylhomoserine lactonase from Bacillus subtilis SS6].
Yin et al., In Wei Sheng Wu Xue Bao, Jul 2015
The sequencing result showed that the length of aiiA(SS6) was 891 bp and the gene contained an Open Reading Frame encoding 297 amino acids.
Cis-Acting Sequence Elements and Upstream Open Reading Frame in Mouse Utrophin-A 5'-UTR Repress Cap-Dependent Translation.
Basu et al., Kalyani, India. In Plos One, 2014
We further identified two sequence elements and one upstream open reading frame in utrophin-A 5'-UTR responsible for repression.
Profiling of EBV-Encoded microRNAs in EBV-Associated Hemophagocytic Lymphohistiocytosis.
Shen et al., Beijing, China. In Tohoku J Exp Med, 2014
Here, we aimed to profile the expression of EBV-miRNAs in children with EBV-HLH by analyzing 44 known EBV-miRNAs, encoded within the BamHI fragment H rightward open reading frame 1 (BHRF1) and the BamHI-A region rightward transcript (BART), in plasma and cellular targets by real-time quantitative PCR.
Sequence analysis of Epstein-Barr virus (EBV) early genes BARF1 and BHRF1 in NK/T cell lymphoma from Northern China.
Luo et al., Qingdao, China. In Virol J, 2014
BamHI-A rightward open reading frame 1 (BARF1) and BamHI-H rightward open reading frame 1 (BHRF1) are two EBV early genes, which may be involved in the oncogenicity of EBV.
Regulation of Epstein-Barr virus reactivation from latency.
Murata, Nagoya, Japan. In Microbiol Immunol, 2014
Reactivation of the virus from latency depends on expression of the viral immediate-early gene, BamHI Z fragment leftward open reading frame 1 (BZLF1).
A killer-protector system regulates both hybrid sterility and segregation distortion in rice.
Zhang et al., Wuhan, China. In Science, 2012
We show that a killer-protector system at the S5 locus encoded by three tightly linked genes [Open Reading Frame 3 (ORF3) to ORF5] regulates fertility in indica-japonica hybrids.
Cell polarity proteins: common targets for tumorigenic human viruses.
Javier, Houston, United States. In Oncogene, 2008
For example, adenovirus (Ad) type 9 is unique among human Ads by causing exclusively estrogen-dependent mammary tumors in experimental animals and in having E4 region-encoded open reading frame 1 (E4-ORF1) as its primary oncogenic determinant.
Identification and characterization of modification enzymes by biochemical analysis of the proteome.
Phizicky et al., Rochester, United States. In Methods Enzymol, 2006
Here we describe a generalized procedure for the biochemical analysis of a yeast proteomic library for identification of nucleic acid-modifying enzymes, by use of the yeast MORF (Moveable Open Reading Frame) library (Gelperin et al., 2005) as the source of protein activity, and the known yeast tRNA methyltransferase Trm4 as a test case.
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