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GoPubMed Proteins lists recent and important papers and reviews for proteins. Page last changed on 19 Aug 2016.

Transmembrane protein 59-like

BSMAP, C19orf4
This gene encodes a predicted type-I membrane glycoprotein. The encoded protein may play a role in functioning of the central nervous system. [provided by RefSeq, Jul 2008] (from NCBI)
Top mentioned proteins: FasT, CAN, TMEM66, SET, CD45
Papers on BSMAP
An integrative approach for efficient analysis of whole genome bisulfite sequencing data.
New
Kenta et al., In Bmc Genomics, Jan 2016
To improve both, we attempted to develop a novel integration of most widely used bisulfite-read mappers: Bismark, BSMAP, and BS-seeker2.
A parallel and sensitive software tool for methylation analysis on multicore platforms.
New
Dopazo et al., Valencia, Spain. In Bioinformatics, Nov 2015
Experimental results on platforms with Intel multicore processors show that HPG-Methyl significantly outperforms in both execution time and sensitivity state-of-the-art software such as Bismark, BS-Seeker or BSMAP, particularly for long bisulphite reads.
Comparison and quantitative verification of mapping algorithms for whole-genome bisulfite sequencing.
Waterland et al., Houston, United States. In Nucleic Acids Res, 2014
We sequenced bisulfite-converted DNA from two tissues from each of two healthy human adults and systematically compared five widely used Bisulfite-seq mapping algorithms: Bismark, BSMAP, Pash, BatMeth and BS Seeker.
Objective and comprehensive evaluation of bisulfite short read mapping tools.
Zhang et al., Blacksburg, United States. In Adv Bioinformatics, 2013
We compared five bisulfite short read mapping tools, BSMAP, Bismark, BS-Seeker, BiSS, and BRAT-BW, representing two classes of mapping algorithms (hash table and suffix/prefix tries).
BS Seeker: precise mapping for bisulfite sequencing.
Pellegrini et al., Los Angeles, United States. In Bmc Bioinformatics, 2009
When mapping to the human genome, BS Seeker generates alignments significantly faster than RMAP and BSMAP.
BSMAP: whole genome bisulfite sequence MAPping program.
Li et al., Houston, United States. In Bmc Bioinformatics, 2008
RESULTS: We developed an efficient bisulfite reads mapping algorithm BSMAP to address the above issues.
Functional screening for proapoptotic genes by reverse transfection cell array technology.
Lichter et al., Heidelberg, Germany. In Genomics, 2006
For 6 of them apoptosis induction could be confirmed both by TUNEL assay and by FACS analysis of cells stained according to Nicoletti: 1 gene was not yet annotated for an apoptotic function (ST6GAL2), while 5 genes were without annotated function (FLJ20551, CXorf12, FAM105A, TMEM66, C19orf4).
BSMAP, a novel protein expressed specifically in the brain whose gene is localized on chromosome 19p12.
Gauchat et al., Saint-Pierre-des-Corps, France. In Biochem Biophys Res Commun, 1999
Using the sequence of cosmids derived from chromosome 19p12, we have identified a gene encoding a novel protein, BSMAP (brain-specific membrane-anchored protein) and cloned cDNA encoding the full-length open reading frame.
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